Details for MX000002

General Information

MX000002

Anr

PA1544

Pseudomonas aeruginosa PAO1 chromosome, complete genome.

NCBI GenBank BacDive

Frequency Matrix

A 0 0 0 7 0 2 0 1 3 7 1 0 11 9
T 10 11 0 2 4 2 5 0 1 0 10 0 0 0
G 0 0 11 0 0 3 3 7 3 4 0 0 0 2
C 1 0 0 2 7 4 3 3 4 0 0 11 0 0
Consensus T T G M Y N B S N R T C A A

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF098381 arcDABC arginine deiminase pathway operon
TTGACgtggATCAG
5820832 5820845 + 8868444
MF098382 azurin operon
TTGACctgaATCAG
5522183 5522196 - 9308169
MF098383 hcnABC operon
CTGTCatggATCAA
2412467 2412480 + 11092854
MF098384 hemN operon
TTGATacaaATCAA
1684013 1684026 - 9767567
MF098385 hemF operon
TTGACggccGTCAA
25630 25643 + 9767567
MF098388 PA0526 operon
TTGATcgcgGTCAA
585953 585966 - 7664887
MF098389 dnr operon
TTGCCgtgcGTCAA
586725 586738 - 9350869
MF098411 nirSMCFDLGHJEN/NirQOP operon
TTGACcggaATCAA
580224 580237 + 1849489
MF098463 cioAB operon
TTGTCTCGCGACAA
4406622 4406635 - 9179851
MF098464 cioAB operon
TTGCTCTGCATCAA
4406558 4406571 - 9179851