Details for MX000019

General Information

MX000019

Spo0A (II)

BSU24220

Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.

NCBI GenBank BacDive

Frequency Matrix

A 21 19 4 0 13 0 23 71 72 47 33 44
T 55 58 79 1 65 3 3 1 5 25 24 18
G 5 4 1 86 2 1 61 8 9 9 26 15
C 6 6 3 0 7 83 0 7 1 6 4 10
Consensus W W T G W C R A A W N N

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF097635 spoIIG operon
CCTCTCAACATT
1603681 1603692 + 14651647
MF097636 spoIIG operon
ATTGACAGACTT
1603694 1603705 + 14651647
MF097637 abrB operon
AATGACGAAGAA
45178 45189 - 14651647
MF097638 abrB operon
TTTGTCGAATAA
45188 45199 - 14651647
MF097639 kinC operon
NA
1517686 1517697 + 14651647
MF097640 spo0A operon
TTTGTCGAATGT
2518878 2518889 - 14651647
MF097641 kinA promoter
TATGTCGAAACA
1469988 1469999 + 14651647
MF097642 spo0F operon
AATGTCGTAAAG
3810017 3810028 - 14651647
MF097643 spo0F operon
TTTGACGAAAAT
3809944 3809955 - 14651647
MF097789 spo0A operon
TTAGTCGAAAAA
2518966 2518977 - 14651647
MF097790 spo0A ooperon
TTTGTCGAATGT
2518878 2518889 - 7642487
MF097812 spoIIE operon
TTTGACAAAATC
70467 70478 + 14651647
MF097813 spoIIE operon
GCAGAAACCGTCGAAGA
70427 70443 + 14651647
MF097814 spoIIE operon
CTTTTCATAAACGAATAT
70405 70422 + 14651647
MF097815 spoIIE operon
TTTTTAGACAAC
70381 70392 + 14651647
MF097816 spoIIA operon
ttcattccGTCGAAatc
2445038 2445054 - 8288522
MF097817 spoIIA operon
TATGCCGAATGA
2445081 2445092 - 14651647
MF098506 skfA operon
TATGTCAATAGA
213898 213909 + 14651647
MF098507 skfA operon
TACTTCGACAAT
213854 213865 + 14651647
MF098508 yppDE operon
TTTGTCGAAAAC
2339594 2339605 - 14651647
MF098509 yttP operon
TTTGTCGATAAG
3033099 3033110 - 14651647
MF098510 yttP operon
TTTTTCGACATG
3033173 3033184 - 14651647
MF098511 ywkC operon
TTTGCCGAATCT
3798703 3798714 + 14651647
MF098512 yocH operon
TGATTTGACATT
2093825 2093836 - 14651647
MF098513 yneE operon
TTATCCGACAAA
1921907 1921918 + 14651647
MF098514 ycgM operon
ttattcgacaga
343959 343970 - 14651647
MF098515 accAD operon
GCGTTTGACAAA
2989658 2989669 - 14651647
MF098516 accAD operon
TTTGACAAAAAA
2989655 2989666 (null) 14651647
MF098517 yqzCD operon
TTTCTCGACAAA
2576267 2576278 + 14651647
MF098518 med operon
CTTGTCAAAAGG
1206604 1206615 + 14651647
MF098519 med operon
ATTTTCGACAAA
1206521 1206532 + 14651647
MF098520 ftsEX operon
ATTGTCGAATGC
3625564 3625575 - 14651647
MF098521 tkt operon
TTATGTGACAAA
1919751 1919762 + 14651647
MF098522 fruR operon
TTTGTCGAATTT
1507407 1507418 + 14651647
MF098523 yvyE-yvhJ operon
TATGTCGAATTA
3646598 3646609 + 14651647
MF098524 relA-yrvI operon
TTTGTCGAAAAA
2822644 2822655 - 14651647
MF098525 holB-yaaT operon
ATTGGCGAAATA
40612 40623 + 14651647
MF098526 metS operon
CTTTTTGACATT
45602 45613 + 14651647
MF098527 dnaG operon
CCTGTCGAACGA
2603392 2603403 - 14651647
MF098528 dnaG operon
TTTTCCGGCAAA
2603490 2603501 - 14651647
MF098529 yusD operon
ATGGTCGAAAGA
3365144 3365155 - 14651647
MF098530 yusD operon
TCTTGCGACAAA
3365007 3365018 - 14651647
MF098531 ykuL operon
CTTTTCGACAAA
1485371 1485382 + 14651647
MF098532 ykzF operon
AATGTCGAATTA
1485007 1485018 + 14651647
MF098533 yrrL operon
ACTGACGAAGAA
2797157 2797168 - 14651647
MF098534 yrrL operon
ATTGCCGAAATA
2797011 2797022 - 14651647
MF098535 fldB-flgC operon
ATTCTCGACAAG
1691225 1691236 + 14651647
MF098536 lytE operon
TTTGTCACATGA
1018880 1018891 + 14651647
MF098537 ykaA operon
TTTTTCGACAAA
1351156 1351167 - 14651647
MF098538 ykaA operon
TTTTTCGACTTT
1351176 1351187 - 14651647
MF098539 nfrA operon
GCTTTTGACAGC
3912156 3912167 - 14651647
MF098540 nfrA operon
AAGCTCGACACT
3912414 3912425 - 14651647
MF098541 nfrA operon
GCTGACGAAATA
3912357 3912368 - 14651647
MF098542 ywcH operon
TATTCCGACAAA
3911419 3911430 - 14651647
MF098543 ywcH operon
AATGGCGAATGA
3911385 3911396 - 14651647
MF098544 dnaA operon
TTTGTCGAAAAG
268 279 + 14651647
MF098545 ylmDEFGH operon
TTTGTCGAAAGG
1609305 1609316 + 14651647
MF098546 ylmDEFGH operon
TCTTCCGGCACA
1609209 1609220 + 14651647
MF098547 ylmDEFGH operon
CCTCGACACTCA
1609361 1609372 + 14651647
MF098548 rapA operon
TTAGCCGAAATT
1315769 1315780 + 14651647
MF098549 rapA operon
AAATTCGACAAT
1315776 1315787 + 14651647
MF098550 comK operon
TCTATCGACATA
1116911 1116922 + 14651647
MF098551 comQ operon
TTTGTCACAACT
3256858 3256869 - 14651647
MF098552 yvyD operon
AAATTCGACAAA
3631672 3631683 - 14651647
MF098553 yvyD operon
CATGTCGAGAGG
3631507 3631518 - 14651647
MF098554 veg operon
TTTGTCAAAATA
52654 52665 + 14651647
MF098555 veg operon
TTTGACAAAAAT
52712 52723 + 14651647
MF098556 veg operon
TTATTTGACAAA
52709 52720 + 14651647
MF098557 veg operon
AATTTTGTCAAA
52651 52662 + 14651647
MF098558 pur operon
CTTGACGAACTC
698684 698695 + 14651647
MF098559 pur operon
GCATGCGACATA
698672 698683 + 14651647
MF098560 yjcP operon
TCGTTCGACAAA
1266539 1266550 + 14651647
MF098561 yppF operon
TTTGTCAAATTG
2338481 2338492 + 14651647
MF098562 yppF operon
TGTGTCGAAAGT
2338491 2338502 + 14651647
MF098563 yppF operon
GCATTTGTCAAA
2338478 2338489 + 14651647
MF098564 yjcP operon
ATCCCCGACAAA
1266507 1266518 + 14651647
MF098565 ywqCD operon
AATGTCGAATTA
3733357 3733368 - 14651647
MF098566 spoIIG operon
TTCCTCGACAAA
1603638 1603649 + 14651647
MF098567 spoIIE operon
TCTTTTGACAAA
70464 70475 + 14651647
MF098568 spoIIA operon
AATGTCAAAGAA
2444966 2444977 - 14651647
MF098569 spoIIA operon
TTTGTCACGGTG
2445061 2445072 - 14651647
MF098570 kinC operon
NA
1517770 1517781 + 14651647
MF098571 dltABCDE operon
ATTGTCGAAAAA
3952076 3952087 + 14651647
MF098572 sinIR operon
CCATTCGACATC
2552272 2552283 + 14651647
MF098573 spo0A operon
TTTGTCAAATTT
2518983 2518994 - 14651647
MF098574 spo0A operon
TTTTTCGACAAA
2519009 2519020 - 14651647