Details for MX000022

General Information

MX000022

CRE

BSU29740

Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.

CcpA binding site

NCBI GenBank BacDive

Frequency Matrix

A 1 0 10 12 12 3 0 0
T 12 0 2 0 1 1 0 0
G 0 13 1 0 0 8 0 13
C 0 0 0 1 0 1 13 0
Consensus T G A A A R C G

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF097603 acoR operon
TGAAAGCGCTTTAT
883692 883705 + 11274109
MF097657 acoR operon
TGAAAACGGCGTGT
883723 883736 + 11274109
MF097658 acoR operon
TGAATTCGGTCCCA
883759 883772 + 11274109
MF097659 araE operon
ATGAAAACGCTTTACT
3485489 3485504 - 11750820
MF097660 araA operon
TTGAAAGCGTTTTATT
2948898 2948913 - 11274109
MF097662 xylAB operon
ttggaagcgcaaacaa
1891196 1891211 + 11750820
MF097664 ynaJ operon (xynC operon)
TTGAAAGCGCTTTTAT
1887253 1887268 + 11750820
MF097678 glvARC operon
TGTAAACGTTATCA
889995 890008 + 11489864
MF097697 mmgABCDE operon
TGTAAGCGCTGTCT
2514065 2514078 - 8759838
MF097698 bglPH operon
TGAAAGCGTTGACA
4035846 4035859 - 8626332
MF097700 ccpC operon
gaaaAAAGAAAGCGCATACATA
1485932 1485953 + 11985717
MF097705 glpFK operon
TGACACCGCTTTCA
1002320 1002333 + 11929549
MF099693 glpK operon
TGTAAGCGTTATAT
1003232 1003245 + 16267306
MF099695 ndk operon
tgaaagcctataca
2381065 2381078 - 16267306
MF099696 odhA operon
tggaagcgttttta
2110942 2110955 - 16267306
MF099697 odhB operon
tgaaaaagtaacca
2108396 2108409 - 16267306
MF099698 dacC operon
aggaagcgtttcct
1999569 1999582 - 16267306
MF099699 rbsA operon
TGAAAGCGCTAGCA
3704028 3704041 + 16267306
MF099700 rbsB operon
TTTTAACGTTATCA
3706167 3706180 + 16267306
MF099701 rbsC operon
TGAAAACGGAACAA
3705166 3705179 + 16267306
MF099702 rbsK operon
TGGAACCGGTTACA
3702643 3702656 + 16267306
MF099703 rbsR operon
TGAAAACGCTAAAC
3701096 3701109 + 16267306
MF099704 rbsR operon
TGTAAACGGTTACA
3701378 3701391 + 16267306
MF099705 sdhC operon
tgtaaccggtatca
2907528 2907541 - 16267306
MF099706 csbX operon
tgaaaacggtgcca
2838458 2838471 - 16267306
MF099707 citZ operon
tgtaagcattttct
2981442 2981455 - 16267306
MF099708 cstA operon
tgaatgcggttaca
2937266 2937279 - 16267306
MF099710 ctaC operon
NA
1560978 1560991 + 16267306
MF099711 qcrB operon
tgtaaccgttatcc
2363666 2363679 - 16267306
MF099712 sucC operon
TGAAAGCGCAGTCT
1680381 1680394 + 16267306
MF099713 sucC operon
ATAAAACGCTTACT
1680707 1680720 + 16267306
MF099715 bglH operon
tggaagcgttacca
4032866 4032879 - 16267306