Details for MX000023

General Information

MX000023

ComK

BSU10420

Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.

NCBI GenBank BacDive

Frequency Matrix

A 20 16 18 16 3 7 6 1 7 1 1 1 0
T 0 3 2 2 9 4 5 5 5 19 19 18 17
G 0 1 0 1 2 4 5 8 6 0 0 0 0
C 0 0 0 1 6 5 4 6 2 0 0 1 3
Consensus A A A A N N N N N T T T T

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF097679 comK operon
AAAAgatgaTTTT
1117006 1117018 + 9585513
MF097680 comK operon
AAAAtcggtTTAT
1116962 1116974 + 9585513
MF097681 addBA operon
AAAAggccgTTTT
1136230 1136242 + 9585513
MF097682 addBA operon
ATAAtcagcTTTT
1136209 1136221 + 9585513
MF097683 recA operon
AAAAcatgaTTTC
1764499 1764511 + 9585513
MF097684 recA operon
ATTAtgataTTTT
1764520 1764532 + 9585513
MF097685 nucA operon
AAAAttacgATTT
372693 372705 - 9585513
MF097686 nucA operon
AAACaaataTTTC
372714 372726 - 9585513
MF097687 uvrB operon (dinA operon)
AAAGcaggtTTTT
3615056 3615068 - 9585513
MF097688 uvrB operon (dinA operon)
AATAcctgcTTTT
3615077 3615089 - 9585513
MF097689 comC operon
AAAAaaagaTTCT
2865276 2865288 - 9585513
MF097690 comC operon
AAAAttgaaTATT
2865245 2865257 - 9585513
MF097691 comG operon
AGAAttggtTTTT
2560170 2560182 - 9585513
MF097692 comG operon
AAAAtcacgTTTT
2560139 2560151 - 9585513
MF097693 comFA promoter
ATATtcttaTTTT
3643616 3643628 - 9585513
MF097694 comFA operon
AAATctccgTTTT
3643647 3643659 - 9585513
MF100312 comE operon
9585513
MF100347 cspB operon
9585513
MF100370 comE operon
9585513
MF100378 cspB operon
9585513