Details for MX000069

General Information

MX000069

SigE (36-mer)

BSU15320

Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.

(-35 region)-N13-(-10 region)

NCBI GenBank BacDive

Frequency Matrix

A 1 0 2 0 1 1 4 0 3 2 1 0 1 1 1 0 2 1 0 2 1 0 1 0 0 4 0 4 1 2 0 0 1 1 2 2
T 1 2 2 1 2 0 0 4 0 1 1 3 1 2 3 0 0 1 2 0 2 1 2 1 0 0 4 0 2 1 1 4 3 1 2 0
G 1 2 0 3 1 0 0 0 1 1 0 1 2 0 0 3 1 1 1 0 0 2 0 3 0 0 0 0 0 1 1 0 0 2 0 2
C 1 0 0 0 0 3 0 0 0 0 2 0 0 1 0 1 1 1 1 2 1 1 1 0 4 0 0 0 1 0 2 0 0 0 0 0
Consensus N K W K D M A T R D H K D H W S V N B M H B H K C A T A H D B T W D W R

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF097945 spoIIIAA operon
cttgTCATAAAgtctgcctcacatCATACATTttaaagaagc
2537640 2537681 - 1729246
MF097954 dacB operon
ttattcATAACTgatggacatgcgCATAAACTtgtacaaacca
2424552 2424594 - 8990290
MF097956 spoVE operon
ggtgacATGTTTatagatgccgtgCATATGCTtaagtaagggc
1590218 1590260 + 8990290
MF097960 yknT operon
agaggaATAGCTgttcagtatttgCATATTGTagtgttaacat
1495388 1495430 - 8990290