Details for MX000072

General Information

MX000072

SigB (33-mer)

BSU04730

Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.

(-35 region)-N15-(-10 region)

NCBI GenBank BacDive

Frequency Matrix

A 5 4 4 0 0 1 1 3 5 1 7 4 4 3 5 3 5 3 2 3 4 4 5 3 1 0 2 5 8 6 3 4 3
T 2 4 2 0 10 9 9 6 2 3 1 3 3 4 2 3 2 1 3 2 5 2 2 2 2 0 0 4 2 4 2 3 3
G 1 2 2 10 0 0 0 1 1 2 2 3 3 2 2 2 1 2 5 1 0 2 0 3 7 10 8 1 0 0 2 2 4
C 2 0 2 0 0 0 0 0 2 4 0 0 0 1 1 2 2 4 0 4 1 2 3 2 0 0 0 0 0 0 3 1 0
Consensus N D N G T T T W N N R D D N N N N N D N W N H N K G G W A W N N D

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF097895 ydaB operon
gaaataGTTTTAcaagttatcttttttGGGTtAaaatgggtg
469324 469365 + 11717291
MF097902 yfkED operon
tacaacGTTTTccaaaagcaggcaacctGaAAAaagcctata
865075 865116 + 11717291
MF097904 yflS operon
aacttaGTTaAggagtagaatggaaaaGGGgATcggaaaaca
829317 829358 + 11717291
MF097906 yhaS operon
cataaaGTTTTAtatagtgaaaaagaaGGGAtAtcttgATGa
1061323 1061364 - 11717291
MF097915 ytaG operon
NA
3162257 3162298 + 11717291
MF097916 yunG operon
gttctaGTTTTTaaaatctcatcaacgtGGTATcttttttta
3327166 3327207 - 11717291
MF097921 yvbG operon
ataaagGTTTAccgggaaatcgcctccGGGTAAaagggtgga
3472521 3472562 - 11717291
MF097922 yvgN operon
ttaagcGtaTTAttggtatcggctgagaGGAATgtgagataa
3427619 3427660 - 11717291
MF097924 yvgW operon
gtttttGTTTTTcattgacactttcttGGaAAAcaacatata
3441061 3441102 - 11717291
MF097932 yxzF operon
tagcatGTTTAAggaagaggcaatcagGGGAATGgttgagaa
3964239 3964280 - 11717291