Details for MX000103

General Information

MX000103

ExsA

PA1713

Pseudomonas aeruginosa PAO1 chromosome, complete genome.

NCBI GenBank BacDive

Frequency Matrix

A 1 1 0 1 1 1 1 1 1 0 0 2 4 4 4 4 2 4 2 2 1 1 2 0 0 1 1 1 2 0 0 1 3 2 3 2 1 1 0
T 0 0 1 1 2 2 1 1 1 0 4 1 0 0 0 0 1 0 0 0 1 0 1 0 1 1 2 1 2 2 3 1 0 0 1 0 1 0 1
G 1 2 2 1 0 0 1 1 1 1 0 1 0 0 0 0 1 0 1 1 2 2 1 1 1 0 0 1 0 1 0 2 1 0 0 2 1 1 1
C 2 1 1 1 1 1 1 1 1 3 0 0 0 0 0 0 0 0 1 1 0 1 0 3 2 2 1 1 0 1 1 0 0 2 0 0 1 2 2
Consensus V V B N H H N N N S T D A A A A D A V V D V D S B H H N W B Y D R M W R N V B

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF098412 exoS operon
tgccgattccagTGAAAAAAcggcggccaatcctgataggc
4304558 4304598 - 7868588
MF098413 exsD-pscBL operon
aatgccgggcTAAAAATAactgacgTTTTTTGAaagcccggtagcg
1858087 1858132 + 8971719
MF098414 exsCBA operon
tgtggcttTTTTCTTAAAAGAaaagtctctcagTGACAAAAgc
1855771 1855813 + 9045825
MF100278 orf1 operon
7868588