Details for MX000107

General Information

MX000107

OxyR

PA5344

Pseudomonas aeruginosa PAO1 chromosome, complete genome.

NCBI GenBank BacDive

Frequency Matrix

A 2 0 1 0 2 0 1 0 1 0 1 0 2 2 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 2 2 0
T 0 2 1 0 0 2 1 2 1 0 0 2 0 0 2 1 1 0 0 0 1 0 0 2 0 0 0 0 2 1 1 1 2 0 0 0 2
G 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 2 1 0 2 1 1 1 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0
Consensus A T W G A T W T W S M T A A T Y K S M S Y G R T G R S S T W W W T C A A T

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF098455 katB operon
ATTGatattccTAATcggcgcgGTGAggtttttCAAT
5171801 5171837 - 9852011
MF098456 ahpC operon
ATAGatttagaTAATttcactgATGGcctaaatCAAT
158084 158120 + 9852011