Details for MX000191

General Information

MX000191

PpsR

RSP_0282

Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence.

NCBI GenBank BacDive

Frequency Matrix

A 0 0 0 4 16 11 6 2 10 13 9 6 0 2 0 24 0 24 0
T 24 0 24 2 2 2 5 8 6 5 4 7 11 16 7 0 0 0 0
G 0 24 0 1 3 8 7 9 2 2 7 5 4 4 17 0 0 0 0
C 0 0 0 17 3 3 6 5 6 4 4 6 9 2 0 0 24 0 0
Consensus T G T M N N N N N N N N Y K K A C A

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF099565 bchC operon
tgtcccgttaatgttaca
1988398 1988415 - 16207904
MF099666 pucC operon
TGTGCCTGAAGCCCGACA
2043148 2043165 + 10648776
MF099667 pucBA operon
TGTCAGCGCAATGTGACA
2042538 2042555 + 17209035
MF099668 pucBA operon
TGTCAGCCAACACTGACA
2042513 2042530 + 17209035
MF099669 bchM operon
TGTCGCGGGGCTTCTACA
2019094 2019111 + 10648776
MF099670 bchF operon
NA
2010436 2010453 + 16207904
MF099672 bchF operon
TGTCAAAGAAAATTGACA
2010224 2010241 + 16207904
MF099673 ppaA operon
tgtcaattttctttgaca
2010292 2010309 - 16207904
MF099674 bchE operon
tgtcagacgcactggaca
2008295 2008312 - 10648776
MF099675 bchE operon
tgtcaactgaaatggaca
2007779 2007796 - 16207904
MF099677 bhcG operon
tgtcaatctatccttaca
2005201 2005218 - 10648776
MF099678 crtA operon
TGTCTAGTCAGGTTTACA
1996341 1996358 + 16207904
MF099679 crtI operon
tgtaaacctgactagaca
1996409 1996426 - 16207904
MF099680 crtD operon
tgtcaactttttcttaca
1990609 1990626 + 16207904
MF099681 crtE operon
tgtaagaaaaagttgaca
1990609 1990626 - 16207904
MF099682 bchC operon
tgtccaataaagttgaca
1988424 1988441 - 10648776
MF099684 bchZ operon
tgtacggcgtcttcaaca
1984280 1984297 - 10648776
MF099685 pufQ operon
tgtacggcgtcttcaaca
1984280 1984297 - 10648776
MF099714 argD operon
TGTCATTCCTTCCTGACA
609508 609525 + 16207904
MF099728 pucB operon
TGTCAGCCAACACTGACA
2042513 2042530 + 16207904
MF099730 pucB operon
TGTCAGCGCAATGTGACA
2042538 2042555 + 16207904
MF099733 puc2B operon
TGTCATGCCATGCAGACA
146245 146262 + 16207904
MF099736 puc2B operon
TGTCAGGGATTCGATACA
146270 146287 + 16207904
MF099737 ppaA operon
tgtcaattctgacttaca
2010436 2010453 - 16207904