Details for MX000209

General Information

MX000209

NtcA

sll1423

Synechocystis sp. PCC 6803 chromosome, complete genome.

NCBI

Frequency Matrix

A 0 2 6 4 2 3 5 4 3 3 4 0 7 0
T 0 7 1 2 3 3 3 4 2 3 3 8 0 1
G 9 0 1 1 1 2 1 0 1 3 0 1 2 0
C 0 0 1 2 3 1 0 1 3 0 2 0 0 8
Consensus G T N N N N W W N D H T A C

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF099772 GlnA operon
GTAGCGAAAAATAC
531349 531362 + 9098067
MF099773 ntcA operon
gagtacatggtggtgcga
1590197 1590214 - 11161053
MF099774 Amt1 operon
gtagtaaatcatac
2971375 2971388 - 9813059
MF099775 Amt1 operon
gtagattaaagtac
2971204 2971217 - 9813059
MF099776 Icd operon
GTAACAGCCAATGC
282984 282997 + 8763933
MF099777 GlnN operon
GTATCTATATTGTC
2128688 2128701 + 9098067
MF099778 GlnB operon
gtactgatttttac
2152718 2152731 - 16303755
MF099779 NirA operon
GTAATTTACGTTAC
2769052 2769065 + 16303755
MF099780 NrtA operon
gttacaaactatac
1010656 1010669 - 16303755