Details for MX000274

General Information

MX000274

LexA

Rv2720

Mycobacterium tuberculosis H37Rv complete genome.

imported from the CollecTF database

NCBI

Frequency Matrix

A 1 2 0 37 38 7 31 10 25 0 4 3 0 0 0 39 9 12
T 37 0 0 0 4 1 1 11 8 37 1 39 38 3 2 0 11 11
G 1 0 42 0 0 0 10 3 4 0 37 0 4 0 40 3 5 3
C 3 40 0 5 0 34 0 18 5 5 0 0 0 39 0 0 1 0
Consensus T C G A A C A C A T G T T C G A T A

Sequence Logo

Motif List

Motif AccMotif NameBinding SequenceStartEndOrientationPubMed-ID
MF103360 Rv2737c operon
TCGAACAGGTGTTCGG
3051532 3051547 - 12029045
MF103361 RVBD_1378c operon
TCGAACACATGTTCGATT
1552514 1552531 - 22528497
MF103362 RVBD_3074 operon
TCGAACACATGTTCGAGA
3436768 3436785 + 22528497
MF103363 RVBD_3370c operon
TCGAACAATTGTTCGATA
3784970 3784987 + 22528497
MF103364 RVBD_2719c operon
TCGAACACATGTTTGATT
3031750 3031767 + 22528497
MF103365 RVBD_1703c operon
TCGAATACATGTTCGAAT
1928573 1928590 + 22528497
MF103366 RVBD_1057 operon
TCGAAAATATATTCGATA
1178866 1178883 + 22528497
MF103367 RVBD_2737c operon
CCGAACACCTGTTCGATT
3051542 3051559 + 22528497
MF103368 RVBD_3260c operon
TCGATCACTTGTTCGAAT
3640307 3640324 - 22528497
MF103369 RVBD_3395c operon
TCGAAAATATGTTCGAAG
3811831 3811848 + 22528497
MF103370 RVBD_2100 operon
TCGCACACATGTTCGAGA
2358503 2358520 + 22528497
MF103371 RVBD_3777 operon
TCGAACGTATGTTCGAGA
4221259 4221276 + 22528497
MF103372 RVBD_0071 operon
TCGAACTCATATTCGAAT
79475 79492 - 22528497
MF103373 RVBD_1000c operon
TCGAACGAATGTGCGATA
1117143 1117160 - 22528497
MF103374 RVBD_2594c operon
CCGAACAATCGTTCGATA
2925415 2925432 + 22528497
MF103375 RVBD_2578c operon
TCGAACAACCGTTCTATA
2903550 2903567 + 22528497
MF103376 RVBD_2517c operon
TCGCTCAAATATTCGAAT
2833846 2833863 - 22528497
MF103377 RVBD_2719c operon
CCGAACATTTGATCGAAG
3031617 3031634 + 22528497
MF103378 RVBD_2719c operon
TCGAACACATGAGTGACT
3031596 3031613 - 22528497
MF103379 RVBD_2719c operon
TCGAACACGCGAGCGATT
3031572 3031589 - 22528497
MF103380 RVBD_2594c operon
GAGAACACCCGTTCGATA
2925179 2925196 + 22528497
MF103381 RVBD_1375 operon
ACGAAAGTCTGTTCGAAG
1547175 1547192 + 22528497
MF103382 RVBD_0095c operon
TCGCTAACATGTTCGAAT
105089 105106 + 22528497
MF103383 RVBD_1589 operon
TCGCTAACATGTTCGAAT
1789834 1789851 + 22528497
MF103384 RVBD_3370c operon
TCGAACAATTGTTCGATA
3784970 3784987 + 22528497
MF103385 RVBD_3777 operon
TCGAACGTATGTTCGAGA
4221259 4221276 + 22528497
MF103386 RVBD_3074 operon
TCGAACACATGTTCGAGA
3436768 3436785 + 22528497
MF103387 Rv1378c operon
TCGAACACATGTTCGA
1552510 1552525 - 12029045
MF103388 Rv3074 operon
TCGAACACATGTTCGA
3436771 3436786 + 12029045
MF103389 Rv3370c operon
TCGAACAATTGTTCGA
3784790 3784805 - 12029045
MF103390 Rv3776 operon
TCGAACGTATGTTCGA
4221081 4221096 + 12029045
MF103391 Rv0336 operon
TCGAAAGTATGTTCGA
400160 400175 + 12029045
MF103392 Rv0515 operon
TCGAAAGTATGTTCGA
606519 606534 + 12029045
MF103393 Rv1000c operon
TCGAACGAATGTGCGA
1117141 1117156 - 12029045
MF103394 Rv1702c operon
TCGAACATGTATTCGA
1928566 1928581 - 12029045
MF103395 Rv2100 operon
TCGCACACATGTTCGA
2358495 2358510 + 12029045
MF103396 Rv2578c operon
TAGAACGGTTGTTCGA
2903540 2903555 - 12029045
MF103397 Rv2579 operon
TCGAACAACCGTTCTA
2903540 2903555 + 12029045
MF103398 Rv2594c operon
TCGAACGATTGTTCGG
2925405 2925420 - 12029045
MF103399 Rv2720 operon
TCGAACACATGTTTGA
3031740 3031755 + 12029045
MF103400 Rv2737c operon
TCGAACAGGTGTTCGG
3051532 3051547 - 12029045
MF103401 Rv3395c operon
TCGAACATATTTTCGA
3811651 3811666 - 12029045